Read a gtypes object into a tidy data frame — read

Transform a strataG gtypes object into a tidy data frame. Used internally in genometranslator and might be of interest for users.

Usage

read_gtypes(data, verbose = FALSE)

Arguments

data: A gtypes object (>= v.2.0.2) in the global environment.
verbose: Logical indicating whether progress messages are emitted. Default: verbose = FALSE.

Dependencies

Required package dependencies are declared in DESCRIPTION and installed with genometranslator. Run genometranslator_dependencies() to inspect core packages, optional packages, and external executables.

gtypes support requires the optional GitHub package strataG. Consult its repository for current installation and troubleshooting information.

References

Archer FI, Adams PE, Schneiders BB. strataG: An r package for manipulating, summarizing and analysing population genetic data. Molecular Ecology Resources. 2017; 17: 5-11. doi:10.1111/1755-0998.12559

Author

Thierry Gosselin thierrygosselin@icloud.com