Skip to contents

Install BayeScan with Conda or Mamba

Source: R/bayescan_helpers.R
install_bayescan.Rd

Creates a dedicated environment and installs the Bioconda BayeScan 2.1 package. Installation is performed only when this function is called explicitly.

Usage

install_bayescan(
  conda.env = "genomics",
  conda = NULL,
  force = FALSE,
  verbose = TRUE
)

Arguments

conda.env

Name of the environment to create. Default: conda.env = "genomics".

conda

Optional path to a Conda, Mamba, or Micromamba executable. Default: conda = NULL.

force

Logical. Re-run the installation even when BayeScan is already available in the environment. Default: force = FALSE.

verbose

Logical. Display installation progress. Default: verbose = TRUE.

Value

Invisibly returns the installed BayeScan executable path.