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Assignment analysis

assignment_ngs()
Assignment analysis tailored for RADseq data

Fst

fst_NEI87()
A fast implementation of Nei's 1987 Fst (overall and paiwise estimates)
fst_WC84()
A fast implementation of Weir and Cockerham (1984) Fst/Theta (overall and paiwise estimates)

Utility

dlr()
Genotype likelihood ratio distance (Dlr)
heatmap_fst()
heatmap_fst
import_subsamples()
Import individual's assignment results of different subsample folder.
import_subsamples_fst()
Import the fst ranking from all the subsample runs inside an assignment folder.
install_gsi_sim()
downloads gsi_sim that is appropriate for the operating system

Data

data_assigner_sim_01
Simulated dataset to test assigner
data_assigner_sim_02
Simulated dataset to test assigner